STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06408.1Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (161 aa)    
Predicted Functional Partners:
AKM06407.1
Ferredoxin; Pfam:pfam04324 BFD-like [2Fe-2S] binding domain.
  
 
 0.931
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.927
AKM06319.1
CheA kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.532
AKM06238.1
Putative low temperature-induced protein; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family.
   
  
 0.497
AKM06406.1
Membrane protein, putative; Pfam:pfam04235 Protein of unknown function (DUF418).
       0.484
AKM06387.1
Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family.
  
  
 0.462
AM2010_63
Pfam:pfam00072 Response regulator receiver domain.
  
  
 0.428
AKM08072.1
Hypothetical protein; Pfam:pfam00924 Mechanosensitive ion channel.
  
  
 0.414
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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