STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06409.1Pfam:pfam11026 Protein of unknown function (DUF2721). (162 aa)    
Predicted Functional Partners:
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.809
AKM06411.1
Pfam:pfam05257 CHAP domain.
       0.585
AKM07201.1
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
  
     0.451
AKM06213.1
Outer membrane transport energization protein TonB; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
 
     0.447
AKM07944.1
Membrane protein; Pfam:pfam00593 TonB dependent receptor.
  
     0.413
AKM06984.1
Pfam:pfam04314 Protein of unknown function (DUF461).
  
     0.402
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.