STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06425.1Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328). (214 aa)    
Predicted Functional Partners:
AKM08077.1
Pfam:pfam00072 Response regulator receiver domain.
  
 0.980
AKM07255.1
Pfam:pfam00072 Response regulator receiver domain.
  
 0.951
AKM07266.1
Pfam:pfam00072 Response regulator receiver domain.
 
 0.946
AKM06426.1
Pfam:pfam01510 N-acetylmuramoyl-L-alanine amidase.
 
     0.844
AKM07155.1
Two-component signal transduction histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.767
AKM08013.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.747
AKM06424.1
Peptidase; Pfam:pfam14464 Prokaryotic homologs of the JAB domain.
 
     0.742
AKM06786.1
Pfam:pfam00072 Response regulator receiver domain.
  
 
 0.737
AKM07293.1
Pfam:pfam00072 Response regulator receiver domain.
   
 
 0.670
AKM08520.1
Pfam:pfam00072 Response regulator receiver domain.
   
 
 0.670
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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