STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06426.1Pfam:pfam01510 N-acetylmuramoyl-L-alanine amidase. (234 aa)    
Predicted Functional Partners:
AKM06425.1
Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328).
 
     0.844
AKM06484.1
Beta-hexosaminidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain.
 
  
 0.741
AKM06424.1
Peptidase; Pfam:pfam14464 Prokaryotic homologs of the JAB domain.
  
    0.686
AKM07218.1
Pfam:pfam02016 LD-carboxypeptidase.
    
 0.584
AKM06423.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.557
AKM07153.1
Pfam:pfam01636 Phosphotransferase enzyme family.
  
   
 0.544
AKM07284.1
Beta-lactamase induction signal transducer; Pfam:pfam13000 Acetyl-coenzyme A transporter 1.
 
   
 0.473
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.441
AKM07152.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
  
     0.430
rpoH
RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
     
 0.426
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.