STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06427.1Pfam:pfam03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain. (436 aa)    
Predicted Functional Partners:
AKM08254.1
UDP-glucuronate 5-epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
 0.986
AKM08396.1
UTP--glucose-1-phosphate uridylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
 
 0.976
AKM08547.1
Oxidoreductase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
 
 0.958
AKM08710.1
UDP-glucose 4-epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.941
AKM07805.1
Capsular polysaccharide repeat unit transporter; Pfam:pfam01943 Polysaccharide biosynthesis protein.
  
  
 0.856
AKM07868.1
Membrane protein; Pfam:pfam01943 Polysaccharide biosynthesis protein.
  
  
 0.839
AKM08610.1
Hypothetical protein; Pfam:pfam13440 Polysaccharide biosynthesis protein.
  
  
 0.839
AKM06428.1
Putative serine/threonine protein phosphatase; Pfam:pfam00149 Calcineurin-like phosphoesterase.
       0.809
AKM06214.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
 
  
 0.705
AKM06433.1
Putative bacteriophage N4 adsorption protein B; Pfam:pfam13641 Glycosyltransferase like family 2.
  
  
 0.630
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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