STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06430.1Pfam:pfam04402 Protein of unknown function (DUF541). (251 aa)    
Predicted Functional Partners:
AKM06220.1
Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain.
   
   0.652
AKM06225.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.634
AKM06195.1
OmpA/MotB; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB.
    
   0.618
AKM06431.1
Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
       0.604
AKM07959.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
    
   0.515
AM2010_96
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
    
   0.515
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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