STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06435.1Membrane protein; Pfam:pfam01925 Sulfite exporter TauE/SafE. (304 aa)    
Predicted Functional Partners:
AKM06436.1
Hypothetical protein; Pfam:pfam09608 Putative transmembrane protein (Alph_Pro_TM).
 
     0.954
AKM06999.1
Pfam:pfam00582 Universal stress protein family.
 
   
 0.804
AKM06433.1
Putative bacteriophage N4 adsorption protein B; Pfam:pfam13641 Glycosyltransferase like family 2.
       0.624
AKM06434.1
Hypothetical protein.
       0.624
AKM06437.1
ATPase; Pfam:pfam01935 Domain of unknown function DUF87.
       0.603
nhaA
Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
       0.483
AKM06571.1
DNA repair protein RecO (Recombination protein O); Pfam:pfam11967 Recombination protein O N terminal.
 
     0.438
AKM07569.1
Putative protease; Pfam:pfam13365 Trypsin-like peptidase domain; Belongs to the peptidase S1B family.
  
 
 
 0.409
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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