STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06444.1Pfam:pfam07542 ATP12 chaperone protein. (235 aa)    
Predicted Functional Partners:
AKM06447.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
    0.860
AKM06445.1
Hypothetical protein.
       0.809
AKM06446.1
HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
       0.809
crcB
Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.809
AKM06944.1
Putative methyltransferase.
  
     0.585
AKM06790.1
NADH-ubiquinone oxidoreductase-related protein; Pfam:pfam04800 ETC complex I subunit conserved region.
  
     0.578
AKM07179.1
Molecular chaperone DnaJ; Pfam:pfam00226 DnaJ domain.
  
 
 
 0.568
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.554
rpsU
Pfam:pfam01165 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.542
AKM08410.1
Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.535
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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