STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_37Hypothetical protein. (220 aa)    
Predicted Functional Partners:
AKM08331.1
Hypothetical protein.
  
     0.660
AKM07806.1
Hypothetical protein; Pfam:pfam13650 Aspartyl protease.
  
     0.556
AKM07988.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.544
AKM08610.1
Hypothetical protein; Pfam:pfam13440 Polysaccharide biosynthesis protein.
  
     0.516
AKM07676.1
Pfam:pfam05101 Type IV secretory pathway, VirB3-like protein.
  
     0.484
AKM06433.1
Putative bacteriophage N4 adsorption protein B; Pfam:pfam13641 Glycosyltransferase like family 2.
  
     0.451
AKM06272.1
Carboxyl-terminal protease; Pfam:pfam03572 Peptidase family S41.
  
     0.449
AKM07674.1
Type VI secretion protein; Pfam:pfam04610 TrbL/VirB6 plasmid conjugal transfer protein.
  
     0.438
AKM08572.1
Hypothetical protein.
  
     0.430
AKM07363.1
Pfam:pfam07330 Protein of unknown function (DUF1467).
  
     0.419
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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