STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06466.1Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (290 aa)    
Predicted Functional Partners:
AKM08088.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 0.796
AKM07881.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.773
AKM07723.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.772
AKM07882.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.772
AKM06284.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.772
AKM06465.1
Pfam:pfam00106 short chain dehydrogenase.
  
 0.771
AKM06464.1
Acetyl-CoA C-acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.770
AKM06285.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.769
AKM08615.1
Enoyl-CoA hydratase/isomerase family protein; Pfam:pfam13766 2-enoyl-CoA Hydratase C-terminal region.
 
 
0.764
AKM07684.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.730
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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