STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06476.1Pfam:pfam01266 FAD dependent oxidoreductase. (371 aa)    
Predicted Functional Partners:
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.827
AKM06475.1
Lysophospholipase L2; Pfam:pfam12697 Alpha/beta hydrolase family.
       0.809
AKM07464.1
Putative ISXo8 transposase.
  
 
 0.758
AKM08606.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 
 0.743
AKM06474.1
Peptidase; Pfam:pfam01478 Type IV leader peptidase family.
       0.631
AKM06477.1
Hypothetical protein; Pfam:pfam07411 Domain of unknown function (DUF1508).
       0.630
AKM06992.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.574
AKM06471.1
Pfam:pfam09476 Pilus biogenesis CpaD protein (pilus_cpaD).
 
     0.508
AKM06473.1
Pilus assembly protein CpaB; Pfam:pfam08666 SAF domain.
       0.503
AKM06470.1
Pilus assembly protein CpaE; Pfam:pfam13614 AAA domain.
 
     0.498
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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