STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06532.1Hypothetical protein; Pfam:pfam03154 Atrophin-1 family. (576 aa)    
Predicted Functional Partners:
AKM07049.1
Hypothetical protein.
 
 
 0.785
AKM06483.1
Hypothetical protein; Pfam:pfam05036 Sporulation related domain.
 
     0.777
AKM07063.1
Septum formation initiator.
  
    0.776
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
     0.774
AKM06924.1
Rod shape-determining protein MreD.
  
     0.774
AKM07072.1
Hypothetical protein.
  
     0.774
AKM06690.1
Putative membrane protein.
  
    0.772
AKM07585.1
Hypothetical protein.
  
     0.770
AKM07362.1
ATPase; Pfam:pfam12128 Protein of unknown function (DUF3584).
 
     0.768
AKM06402.1
Tetratricopeptide TPR_4; Pfam:pfam05036 Sporulation related domain.
  
     0.765
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.