STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06534.1Integral membrane protein; Pfam:pfam01027 Inhibitor of apoptosis-promoting Bax1; Belongs to the BI1 family. (247 aa)    
Predicted Functional Partners:
AKM06533.1
Hypothetical protein; Pfam:pfam10722 Putative bacterial sensory transduction regulator.
       0.656
AKM08744.1
Preprotein translocase subunit Tim44; Pfam:pfam04280 Tim44-like domain.
  
  
 0.600
AKM06535.1
Hypothetical protein.
       0.474
AKM08352.1
Putative methionine sulfoxide reductase, SelR; Pfam:pfam01641 SelR domain.
  
   0.444
msrB
Peptide methionine sulfoxide reductase MsrB; Pfam:pfam01641 SelR domain; Belongs to the MsrB Met sulfoxide reductase family.
  
   0.444
AKM06532.1
Hypothetical protein; Pfam:pfam03154 Atrophin-1 family.
       0.435
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.