STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06550.1Methyltransferase; Pfam:pfam10017 Histidine-specific methyltransferase, SAM-dependent. (328 aa)    
Predicted Functional Partners:
AKM06549.1
Hypothetical protein; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
  
 0.993
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.900
AKM06551.1
Peptidase; Pfam:pfam13650 Aspartyl protease.
       0.770
AKM08225.1
Transglycosylase associated protein.
   
    0.696
AKM07929.1
Hypothetical protein; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
 
  
 0.573
AKM06548.1
Pfam:pfam11903 Protein of unknown function (DUF3423).
       0.505
AKM06691.1
Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
  
 0.478
map-2
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.447
AKM08543.1
ABC transporter permease protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
 
     0.420
AKM06681.1
Hypothetical protein.
   
    0.408
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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