STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06569.1TspO and MBR-like protein; Pfam:pfam03073 TspO/MBR family. (183 aa)    
Predicted Functional Partners:
AKM06570.1
Hypothetical protein; Pfam:pfam04380 Membrane fusogenic activity.
       0.813
AKM06571.1
DNA repair protein RecO (Recombination protein O); Pfam:pfam11967 Recombination protein O N terminal.
       0.736
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
       0.732
AKM06573.1
Putative dolichol monophosphate mannose synthase; Pfam:pfam00535 Glycosyl transferase family 2.
     
 0.690
AKM06668.1
Deoxyribodipyrimidine photo-lyase; Pfam:pfam03441 FAD binding domain of DNA photolyase.
 
  
 0.684
AKM06568.1
Hemolysin; Pfam:pfam01728 FtsJ-like methyltransferase.
       0.644
AKM06247.1
Phytoene dehydrogenase (Phytoene desaturase); Pfam:pfam01593 Flavin containing amine oxidoreductase.
 
  
 0.538
AKM06567.1
Hypothetical protein.
       0.477
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.459
AKM06244.1
Pfam:pfam00494 Squalene/phytoene synthase.
 
  
 0.455
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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