Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKM06571.1DNA repair protein RecO (Recombination protein O); Pfam:pfam11967 Recombination protein O N terminal. (200 aa)    
Predicted Functional Partners:
recR
Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
   
 
 0.892
AKM07598.1
PhoH; Pfam:pfam02562 PhoH-like protein.
  
  
 0.880
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
       0.852
AKM06573.1
Putative dolichol monophosphate mannose synthase; Pfam:pfam00535 Glycosyl transferase family 2.
     
 0.852
AKM06570.1
Hypothetical protein; Pfam:pfam04380 Membrane fusogenic activity.
       0.788
atpF
Hypothetical protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
   
 0.761
AKM07179.1
Molecular chaperone DnaJ; Pfam:pfam00226 DnaJ domain.
 
   
 0.751
AKM06569.1
TspO and MBR-like protein; Pfam:pfam03073 TspO/MBR family.
       0.736
AKM08067.1
Hypothetical protein; Pfam:pfam13763 Domain of unknown function (DUF4167).
 
     0.708
atpF-2
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
   
 0.708
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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