STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06574.1Hypothetical protein; Pfam:pfam02366 Dolichyl-phosphate-mannose-protein mannosyltransferase. (423 aa)    
Predicted Functional Partners:
AKM08170.1
Molecular chaperone DnaJ.
  
 
 
 0.788
AKM08324.1
Pfam:pfam04480 Protein of unknown function (DUF559).
  
     0.686
AKM06573.1
Putative dolichol monophosphate mannose synthase; Pfam:pfam00535 Glycosyl transferase family 2.
 
 
 0.608
AKM07322.1
Hypothetical protein; Pfam:pfam13463 Winged helix DNA-binding domain.
  
     0.564
AKM08612.1
Hypothetical protein.
  
     0.535
AKM07179.1
Molecular chaperone DnaJ; Pfam:pfam00226 DnaJ domain.
  
 
 
 0.499
AKM07787.1
Molecular chaperone DnaJ; Pfam:pfam00226 DnaJ domain.
  
 
 
 0.482
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
 
 0.481
AKM08386.1
DNA polymerase III subunit delta.
  
     0.475
AKM06984.1
Pfam:pfam04314 Protein of unknown function (DUF461).
  
     0.474
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.