STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06645.1Molybdopterin-binding protein; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain. (245 aa)    
Predicted Functional Partners:
AKM06646.1
Hypothetical protein; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB.
 
    0.964
AKM08738.1
Sulfite oxidase subunit YedZ; Pfam:pfam01794 Ferric reductase like transmembrane component.
 
  
 0.941
AKM06647.1
Oxidoreductase; Pfam:pfam00106 short chain dehydrogenase.
   
   0.860
AKM07343.1
Hypothetical protein; Pfam:pfam07635 Planctomycete cytochrome C.
   
 
 0.730
AKM07344.1
Hypothetical protein; Pfam:pfam13229 Right handed beta helix region.
   
 
 0.730
AM2010_18
Cytochrome C.
  
 
 0.719
AKM08049.1
Cytochrome C2.
  
 
 0.719
AKM07439.1
Molybdopterin converting factor; Pfam:pfam02391 MoaE protein.
 
   
 0.622
AKM06648.1
17 kDa surface antigen.
 
     0.597
AKM06644.1
Cyclopropane-fatty-acyl-phospholipid synthase; Pfam:pfam02353 Mycolic acid cyclopropane synthetase.
       0.556
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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