STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06647.1Oxidoreductase; Pfam:pfam00106 short chain dehydrogenase. (259 aa)    
Predicted Functional Partners:
AKM06645.1
Molybdopterin-binding protein; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain.
   
 
 0.826
AKM06646.1
Hypothetical protein; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB.
       0.809
AKM07473.1
3-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase.
  
     0.555
AKM06648.1
17 kDa surface antigen.
  
    0.538
AKM06301.1
Sulfatase; Pfam:pfam00884 Sulfatase.
   
 
 0.527
AKM06644.1
Cyclopropane-fatty-acyl-phospholipid synthase; Pfam:pfam02353 Mycolic acid cyclopropane synthetase.
  
  
 0.517
AKM07349.1
Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase.
  
     0.514
AKM07217.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
 
 
 0.504
AKM06849.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.449
AKM06643.1
Cyclopropane-fatty-acyl-phospholipid synthase; Pfam:pfam02353 Mycolic acid cyclopropane synthetase.
  
  
 0.443
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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