STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06681.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AKM06680.1
Medium-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
       0.773
AKM06284.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
     0.649
AKM07124.1
Thioesterase; Pfam:pfam03061 Thioesterase superfamily.
  
     0.582
AKM07400.1
Phenylacetic acid degradation-related protein; Pfam:pfam03061 Thioesterase superfamily.
  
     0.460
AKM06877.1
2-nitropropane dioxygenase; Pfam:pfam03060 Nitronate monooxygenase.
 
     0.438
AKM06550.1
Methyltransferase; Pfam:pfam10017 Histidine-specific methyltransferase, SAM-dependent.
   
    0.408
AKM07881.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
     0.406
AKM06694.1
Glyoxalase; Pfam:pfam13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.401
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.