STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06686.1Pfam:pfam12697 Alpha/beta hydrolase family. (286 aa)    
Predicted Functional Partners:
AKM06687.1
Pfam:pfam00534 Glycosyl transferases group 1.
  
  
 0.813
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.705
AKM06689.1
Pyrrolo-quinoline quinone; Pfam:pfam13360 PQQ-like domain.
 
    0.659
AKM06685.1
Hypothetical protein; Pfam:pfam02696 Uncharacterized ACR, YdiU/UPF0061 family.
     
 0.633
AKM06688.1
Hypothetical protein.
       0.576
AKM06684.1
Aldehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
  
 
 0.522
AKM06690.1
Putative membrane protein.
 
     0.504
AKM07416.1
Acyl carrier protein.
   
 
 0.475
AKM08107.1
Putative acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site.
   
 
 0.475
AM2010_72
Poly-3-hydroxybutyrate synthase; Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus.
 
  
 0.443
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.