STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06698.1Membrane carboxypeptidase (Penicillin-binding protein); Pfam:pfam00912 Transglycosylase. (741 aa)    
Predicted Functional Partners:
AKM07393.1
Putative penicillin binding protein 1A; Pfam:pfam00912 Transglycosylase.
 
 
0.950
AKM08666.1
Membrane carboxypeptidase; Pfam:pfam00912 Transglycosylase.
  
  
 
0.920
AKM07028.1
Pfam:pfam00768 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.915
AKM06519.1
Peptidoglycan synthase FtsI; Pfam:pfam00905 Penicillin binding protein transpeptidase domain.
 
 
 
 0.857
AKM06923.1
Pfam:pfam00905 Penicillin binding protein transpeptidase domain.
 
 
 
 0.717
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.678
AKM08279.1
Membrane protein; Pfam:pfam01551 Peptidase family M23.
  
   
 0.658
AKM06697.1
MoxR-like ATPase; Pfam:pfam12556 Cobaltochelatase CobS subunit N terminal.
       0.648
AKM08400.1
Membrane protein; Pfam:pfam01551 Peptidase family M23.
  
   
 0.637
AKM08263.1
Pfam:pfam01551 Peptidase family M23.
  
   
 0.632
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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