STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06708.1Exoprotein; Pfam:pfam11739 Dicarboxylate transport. (1074 aa)    
Predicted Functional Partners:
AKM06710.1
Pfam:pfam07027 Protein of unknown function (DUF1318).
 
   
 0.955
AKM06709.1
Pfam:pfam13617 YnbE-like lipoprotein.
 
   
 0.951
AKM06820.1
Pfam:pfam03938 Outer membrane protein (OmpH-like).
 
   
 0.755
AKM08411.1
Hypothetical protein.
  
     0.730
AKM07106.1
TPR repeat-containing protein.
 
   
 0.726
AKM06648.1
17 kDa surface antigen.
  
     0.722
AKM06325.1
Putative methyltransferase.
  
     0.705
AKM06711.1
ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
 
     0.703
AKM07063.1
Septum formation initiator.
  
     0.689
AKM07868.1
Membrane protein; Pfam:pfam01943 Polysaccharide biosynthesis protein.
  
     0.631
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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