Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AM2010_63Pfam:pfam00072 Response regulator receiver domain. (264 aa)    
Predicted Functional Partners:
AKM06319.1
CheA kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.922
AM2010_62
Histidine kinase; Pfam:pfam03924 CHASE domain.
 
   
 0.868
AM2010_64
Pfam:pfam00072 Response regulator receiver domain.
 
 
 
 0.845
AKM06220.1
Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain.
  
 
 0.843
AKM06226.1
Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA).
  
 
 0.839
AKM07973.1
Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA).
  
 
 0.839
AKM07089.1
Pfam:pfam07536 HWE histidine kinase.
 
 
 0.838
AKM08058.1
Signal transduction histidine kinase; Pfam:pfam05227 CHASE3 domain.
 
   
 0.820
AM2010_60
RNA polymerase sigma-24 factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.802
fliE
Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
  
 
 0.801
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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