STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_64Pfam:pfam00072 Response regulator receiver domain. (143 aa)    
Predicted Functional Partners:
AM2010_63
Pfam:pfam00072 Response regulator receiver domain.
 
 
 
 0.892
AM2010_62
Histidine kinase; Pfam:pfam03924 CHASE domain.
 
   
 0.804
AKM07529.1
Hypothetical protein; Pfam:pfam05226 CHASE2 domain.
   
 
 0.764
AKM06761.1
Two-component signal transduction histidine kinase; Pfam:pfam00512 His Kinase A (phospho-acceptor) domain.
 
 
 
 0.751
AKM08058.1
Signal transduction histidine kinase; Pfam:pfam05227 CHASE3 domain.
 
   
 0.747
AKM07108.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 
 0.697
AKM07155.1
Two-component signal transduction histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 
 0.697
AKM06787.1
Two-component signal transduction histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 
 0.697
AKM07089.1
Pfam:pfam07536 HWE histidine kinase.
 
   
 0.694
AKM07872.1
Pfam:pfam00072 Response regulator receiver domain.
 
 
 
 0.694
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.