STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKM06732.1Peptidyl-dipeptidase; Pfam:pfam01401 Angiotensin-converting enzyme. (615 aa)    
Predicted Functional Partners:
AKM06733.1
Ribosomal protein S6 modification protein; Pfam:pfam05618 Putative ATP-dependant zinc protease.
       0.731
rimK
Putative alpha-L-glutamate ligase; Pfam:pfam08443 RimK-like ATP-grasp domain; Belongs to the RimK family.
       0.724
AKM06731.1
Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family.
  
  
 0.646
AKM06729.1
Pfam:pfam01323 DSBA-like thioredoxin domain.
       0.612
AKM06735.1
Tryptophan synthase subunit beta.
       0.576
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
    0.565
AKM08689.1
Zinc metalloprotease; Pfam:pfam05649 Peptidase family M13.
  
   
 0.553
AKM08404.1
Pfam:pfam04389 Peptidase family M28.
 
   
 0.518
AKM06699.1
Pfam:pfam00206 Lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
    0.513
AKM07904.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.511
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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