STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06752.1Prolyl 4-hydroxylase, alpha subunit. (222 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.904
AKM07222.1
Proline iminopeptidase; Pfam:pfam00561 alpha/beta hydrolase fold; Belongs to the peptidase S33 family.
     
 0.901
AKM08376.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.900
AKM06945.1
Phosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
   
    0.631
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.603
AKM08648.1
Pfam:pfam02153 Prephenate dehydrogenase.
  
    0.553
AKM06753.1
Cytochrome b-561 transmembrane protein; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB.
       0.549
AM2010_40
Hypothetical protein; Pfam:pfam02586 Uncharacterized ACR, COG2135; Belongs to the SOS response-associated peptidase family.
   
  
 0.536
AKM06754.1
Hypothetical protein; Pfam:pfam11776 Domain of unknown function (DUF3315).
 
     0.528
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.440
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.