Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKM06220.1 | AKM06226.1 | AM2010_130 | AM2010_136 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | 0.997 |
| AKM06220.1 | AKM06795.1 | AM2010_130 | AM2010_712 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.618 |
| AKM06220.1 | AKM07971.1 | AM2010_130 | AM2010_1909 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.909 |
| AKM06220.1 | AM2010_93 | AM2010_130 | AM2010_93 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.899 |
| AKM06220.1 | ihfA | AM2010_130 | AM2010_1477 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.431 |
| AKM06220.1 | rpsO | AM2010_130 | AM2010_1557 | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.618 |
| AKM06226.1 | AKM06220.1 | AM2010_136 | AM2010_130 | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | 0.997 |
| AKM06226.1 | AKM06795.1 | AM2010_136 | AM2010_712 | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.618 |
| AKM06226.1 | AKM07971.1 | AM2010_136 | AM2010_1909 | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.865 |
| AKM06226.1 | AM2010_93 | AM2010_136 | AM2010_93 | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.865 |
| AKM06795.1 | AKM06220.1 | AM2010_712 | AM2010_130 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain. | 0.618 |
| AKM06795.1 | AKM06226.1 | AM2010_712 | AM2010_136 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA). | 0.618 |
| AKM06795.1 | AKM07971.1 | AM2010_712 | AM2010_1909 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.515 |
| AKM06795.1 | AM2010_93 | AM2010_712 | AM2010_93 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Pfam:pfam03963 Flagellar hook capping protein - N-terminal region. | 0.515 |
| AKM06795.1 | dnaA | AM2010_712 | AM2010_1 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.705 |
| AKM06795.1 | ihfA | AM2010_712 | AM2010_1477 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.752 |
| AKM06795.1 | lon | AM2010_712 | AM2010_711 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.565 |
| AKM06795.1 | rpsO | AM2010_712 | AM2010_1557 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.594 |
| AKM06795.1 | rpsT | AM2010_712 | AM2010_2701 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.644 |
| AKM06795.1 | topA | AM2010_712 | AM2010_1020 | Histone-like protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.548 |
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