STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_73Pfam:pfam00155 Aminotransferase class I and II. (401 aa)    
Predicted Functional Partners:
AKM07946.1
NAD(P)H dehydrogenase (Quinone); Pfam:pfam02525 Flavodoxin-like fold.
  
    0.767
AKM08083.1
Pfam:pfam03949 Malic enzyme, NAD binding domain.
  
 
 0.653
AM2010_72
Poly-3-hydroxybutyrate synthase; Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus.
  
    0.603
AM2010_74
Two-component response regulator; Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
     
 0.595
AKM08517.1
Para-aminobenzoate synthase, component I; Pfam:pfam00425 chorismate binding enzyme.
  
 
 0.536
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.520
AKM08700.1
Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.518
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.511
AM2010_75
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.501
AKM08160.1
Pfam:pfam00742 Homoserine dehydrogenase.
 
 
 0.487
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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