STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AKM06832.1Putative intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (212 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
       0.809
AKM06834.1
2-methylthioadenine synthase; Pfam:pfam00919 Uncharacterized protein family UPF0004.
       0.809
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.809
AKM07097.1
Hypothetical protein.
  
    0.651
AKM06836.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
       0.642
AKM07582.1
Pfam:pfam10984 Protein of unknown function (DUF2794).
 
     0.599
AKM08226.1
Pfam:pfam06627 Protein of unknown function (DUF1153).
  
     0.546
AKM07659.1
Hypothetical protein; Pfam:pfam07345 Domain of unknown function (DUF1476).
  
     0.502
AKM06837.1
Ubiquinol-cytochrome C reductase; Pfam:pfam01878 EVE domain.
       0.497
AKM06425.1
Histidine phosphotransferase; Pfam:pfam10090 Uncharacterized protein conserved in bacteria (DUF2328).
  
     0.496
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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