STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06838.1General stress protein CsbD; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
AKM08072.1
Hypothetical protein; Pfam:pfam00924 Mechanosensitive ion channel.
 
  
 0.900
AKM06277.1
Pfam:pfam11450 Protein of unknwon function (DUF3008).
   
    0.823
AKM08110.1
Pfam:pfam02566 OsmC-like protein.
  
  
 0.683
AKM07701.1
Transcriptional regulator.
  
     0.632
AKM06501.1
Hypothetical protein; Pfam:pfam13739 Domain of unknown function (DUF4163).
  
     0.624
AKM08193.1
Putative acetyltransferase; Pfam:pfam14542 GCN5-related N-acetyl-transferase.
  
    0.597
AKM06382.1
Hypothetical protein.
  
    0.597
AKM06385.1
Acetyltransferase; Pfam:pfam14542 GCN5-related N-acetyl-transferase.
  
    0.597
AKM08394.1
Hypothetical protein.
 
     0.586
AKM06837.1
Ubiquinol-cytochrome C reductase; Pfam:pfam01878 EVE domain.
       0.579
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.