STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06859.1Membrane protein; Pfam:pfam01124 MAPEG family. (145 aa)    
Predicted Functional Partners:
AKM06860.1
Membrane protein; Pfam:pfam01124 MAPEG family.
 
    
0.796
AKM07844.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.725
AKM06861.1
Pfam:pfam12847 Methyltransferase domain.
       0.582
AKM06862.1
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Pfam:pfam11899 Protein of unknown function (DUF3419).
       0.582
AKM08679.1
Pfam:pfam13489 Methyltransferase domain.
  
     0.553
AKM07433.1
Hypothetical protein; Pfam:pfam10118 Predicted metal-dependent hydrolase.
  
     0.530
AKM07434.1
FF domain protein; Pfam:pfam10118 Predicted metal-dependent hydrolase.
  
     0.524
AKM08657.1
FF domain-containing protein; Pfam:pfam10118 Predicted metal-dependent hydrolase.
  
     0.477
AKM06863.1
Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
       0.460
AKM07344.1
Hypothetical protein; Pfam:pfam13229 Right handed beta helix region.
  
     0.435
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.