STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06877.12-nitropropane dioxygenase; Pfam:pfam03060 Nitronate monooxygenase. (322 aa)    
Predicted Functional Partners:
AKM08629.1
2-nitropropane dioxygenase; Pfam:pfam03060 Nitronate monooxygenase.
  
  
 
0.908
AKM07389.1
2-nitropropane dioxygenase; Pfam:pfam03060 Nitronate monooxygenase.
     
 0.900
AKM06878.1
Amidohydrolase; Pfam:pfam04909 Amidohydrolase.
       0.569
AKM06849.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.470
AKM06681.1
Hypothetical protein.
 
     0.438
AKM07217.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
  
  
 0.411
AKM07987.1
Acyl carrier protein.
  
  
 0.411
AKM06284.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
  
 0.409
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.