STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_80Iron compound ABC transporter, ATP-binding protein; Pfam:pfam00005 ABC transporter. (257 aa)    
Predicted Functional Partners:
AM2010_81
ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.999
AM2010_82
Vitamin B12 ABC transporter, B12-binding component BtuF; Pfam:pfam01497 Periplasmic binding protein.
 
 
 0.998
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
0.590
AKM07623.1
Molybdate transport system ATP-binding protein; Pfam:pfam00005 ABC transporter.
  
     0.505
AKM07314.1
Pfam:pfam00593 TonB dependent receptor.
 
  
 0.470
AKM08060.1
Cell division cycle protein; Pfam:pfam00004 ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
 
     0.452
AKM07915.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
 
  
 0.438
AM2010_52
Pfam:pfam00593 TonB dependent receptor.
  
  
 0.438
AKM06632.1
Pfam:pfam00593 TonB dependent receptor.
 
   
 0.422
AKM07844.1
Pfam:pfam00593 TonB dependent receptor.
 
  
 0.407
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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