STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06889.1Membrane protein, putative. (226 aa)    
Predicted Functional Partners:
AKM08347.1
Hypothetical protein; Pfam:pfam13180 PDZ domain.
  
     0.699
AKM07339.1
Membrane protein; Pfam:pfam14108 Domain of unknown function (DUF4281).
  
     0.695
purL
Phosphoribosylformylglycinamidine synthase subunit PurL; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]
       0.663
AKM07396.1
Phosphoribosylglycinamide synthetase; Pfam:pfam13535 ATP-grasp domain.
  
     0.568
AKM07246.1
Pfam:pfam06078 Bacterial protein of unknown function (DUF937).
  
     0.545
AKM06886.1
Hypothetical protein; Pfam:pfam05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4.
  
     0.531
AKM07206.1
Hypothetical protein.
  
     0.528
AKM06887.1
Nitroreductase; Pfam:pfam00881 Nitroreductase family.
       0.519
AKM08716.1
Hydrolase, alpha/beta fold family protein.
  
     0.516
AKM06249.1
Pfam:pfam06629 MltA-interacting protein MipA.
  
     0.515
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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