STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06933.1Hypothetical protein; Pfam:pfam06724 Domain of Unknown Function (DUF1206). (265 aa)    
Predicted Functional Partners:
AKM06667.1
Phosphoesterase, PA-phosphatase related protein; Pfam:pfam01569 PAP2 superfamily.
 
     0.648
ychF
Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.625
AKM06562.1
Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core.
  
     0.621
AKM06934.1
Pfam:pfam01663 Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.609
AKM06415.1
Na+/H+ antiporter, CPA1 family protein; Pfam:pfam00999 Sodium/hydrogen exchanger family.
 
     0.595
AM2010_62
Histidine kinase; Pfam:pfam03924 CHASE domain.
  
     0.592
AKM07847.1
Membrane protein.
  
     0.576
AKM08058.1
Signal transduction histidine kinase; Pfam:pfam05227 CHASE3 domain.
  
     0.562
AKM08000.1
Cyclase; Pfam:pfam03364 Polyketide cyclase / dehydrase and lipid transport.
  
     0.559
AKM06331.1
Hypothetical protein; Pfam:pfam10011 Predicted membrane protein (DUF2254).
  
     0.558
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.