STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_86Hypothetical protein. (113 aa)    
Predicted Functional Partners:
AM2010_87
Hypothetical protein; Pfam:pfam04316 Anti-sigma-28 factor, FlgM.
       0.805
AM2010_88
Flagellar protein; Pfam:pfam13144 SAF-like.
       0.643
AM2010_85
Lytic transglycosylase, catalytic.
       0.593
AM2010_83
Sigma 28 (Flagella/Sporulation); Pfam:pfam04545 Sigma-70, region 4; Belongs to the sigma-70 factor family.
       0.592
AM2010_84
Flagellar biosynthesis protein FlhA; Pfam:pfam00771 FHIPEP family.
       0.592
AM2010_90
Hypothetical protein.
       0.473
AM2010_89
Hypothetical protein.
       0.463
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.