STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_89Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AM2010_90
Hypothetical protein.
       0.809
AM2010_88
Flagellar protein; Pfam:pfam13144 SAF-like.
       0.606
AM2010_91
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
       0.550
AM2010_92
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
       0.550
AM2010_93
Pfam:pfam03963 Flagellar hook capping protein - N-terminal region.
       0.548
AM2010_94
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
       0.486
AM2010_86
Hypothetical protein.
       0.463
AM2010_87
Hypothetical protein; Pfam:pfam04316 Anti-sigma-28 factor, FlgM.
       0.456
AM2010_95
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
       0.421
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.