STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM2010_90Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AKM06195.1
OmpA/MotB; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB.
  
 0.995
AM2010_92
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.954
AKM06319.1
CheA kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.942
AM2010_91
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.941
flgK
Flagellar hook-associated protein.
 
  
 0.931
AKM06194.1
Chemotaxis protein MotA.
    
  0.931
AM2010_88
Flagellar protein; Pfam:pfam13144 SAF-like.
  
  
 0.930
AM2010_93
Pfam:pfam03963 Flagellar hook capping protein - N-terminal region.
 
  
 0.908
AKM06220.1
Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain.
 
  
 0.899
AM2010_84
Flagellar biosynthesis protein FlhA; Pfam:pfam00771 FHIPEP family.
  
  
 0.897
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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