STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06983.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
AKM06443.1
ABC transporter; Pfam:pfam03886 Protein of unknown function (DUF330).
  
     0.752
AKM07072.1
Hypothetical protein.
  
     0.746
AKM06481.1
Hypothetical protein.
  
     0.729
AKM06924.1
Rod shape-determining protein MreD.
  
     0.729
AKM07585.1
Hypothetical protein.
  
     0.724
AKM06777.1
XRE family transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain.
  
   
 0.723
AKM06471.1
Pfam:pfam09476 Pilus biogenesis CpaD protein (pilus_cpaD).
  
     0.711
AKM06661.1
Hypothetical protein.
  
     0.711
AKM06690.1
Putative membrane protein.
  
     0.708
AKM06542.1
Pfam:pfam11011 Protein of unknown function (DUF2849).
  
     0.707
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.