Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D521_0032 | D521_0033 | D521_0032 | D521_0033 | Transport-associated protein. | Cytochrome c, class I. | 0.709 |
D521_0032 | gmhA | D521_0032 | D521_0031 | Transport-associated protein. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.792 |
D521_0032 | rsmI | D521_0032 | D521_0030 | Transport-associated protein. | uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.515 |
D521_0033 | D521_0032 | D521_0033 | D521_0032 | Cytochrome c, class I. | Transport-associated protein. | 0.709 |
D521_0033 | D521_0980 | D521_0033 | D521_0980 | Cytochrome c, class I. | Hypothetical protein. | 0.470 |
D521_0033 | D521_0985 | D521_0033 | D521_0985 | Cytochrome c, class I. | Oxidoreductase, molybdopterin binding protein. | 0.624 |
D521_0033 | D521_1049 | D521_0033 | D521_1049 | Cytochrome c, class I. | YVTN beta-propeller repeat-containing protein. | 0.716 |
D521_0033 | D521_1061 | D521_0033 | D521_1061 | Cytochrome c, class I. | Major facilitator transporter. | 0.480 |
D521_0033 | D521_1525 | D521_0033 | D521_1525 | Cytochrome c, class I. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.401 |
D521_0033 | D521_1696 | D521_0033 | D521_1696 | Cytochrome c, class I. | Rieske (2Fe-2S) domain-containing protein. | 0.486 |
D521_0033 | D521_2067 | D521_0033 | D521_2067 | Cytochrome c, class I. | Oxidoreductase, molybdopterin binding protein. | 0.562 |
D521_0033 | gmhA | D521_0033 | D521_0031 | Cytochrome c, class I. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.595 |
D521_0033 | rsmI | D521_0033 | D521_0030 | Cytochrome c, class I. | uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.434 |
D521_0980 | D521_0033 | D521_0980 | D521_0033 | Hypothetical protein. | Cytochrome c, class I. | 0.470 |
D521_0980 | D521_0985 | D521_0980 | D521_0985 | Hypothetical protein. | Oxidoreductase, molybdopterin binding protein. | 0.830 |
D521_0980 | D521_1049 | D521_0980 | D521_1049 | Hypothetical protein. | YVTN beta-propeller repeat-containing protein. | 0.721 |
D521_0980 | D521_2067 | D521_0980 | D521_2067 | Hypothetical protein. | Oxidoreductase, molybdopterin binding protein. | 0.930 |
D521_0985 | D521_0033 | D521_0985 | D521_0033 | Oxidoreductase, molybdopterin binding protein. | Cytochrome c, class I. | 0.624 |
D521_0985 | D521_0980 | D521_0985 | D521_0980 | Oxidoreductase, molybdopterin binding protein. | Hypothetical protein. | 0.830 |
D521_0985 | D521_1525 | D521_0985 | D521_1525 | Oxidoreductase, molybdopterin binding protein. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.413 |
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