STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D521_0259Hypothetical protein. (152 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.773
D521_0250
Hypothetical protein.
  
     0.654
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.634
D521_1106
TPR repeat-containing protein.
  
     0.615
D521_1375
Hypothetical protein.
  
     0.593
D521_0845
DNA binding domain-containing protein.
  
     0.583
D521_1223
Integrase; Belongs to the 'phage' integrase family.
  
     0.577
D521_1131
Hypothetical protein.
  
     0.536
D521_0257
TolC family type I secretion outer membrane protein.
 
     0.531
D521_1109
Inactivated superfamily I helicase-like protein.
  
     0.527
Your Current Organism:
beta proteobacterium CB
NCBI taxonomy Id: 543913
Other names: b. proteobacterium CB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.