STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D521_0635Hypothetical protein. (412 aa)    
Predicted Functional Partners:
D521_0639
Transmembrane pilus assembly protein CpaB1.
 
  
 0.930
D521_0642
Cobyrinic acid a,c-diamide synthase.
 
  
 0.916
D521_0644
Type II secretion system protein.
 
  
 0.897
D521_0636
TadE family protein.
 
     0.883
D521_0640
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.855
D521_0645
Type II secretion system protein.
 
    0.852
D521_0643
Type II secretion system protein E.
 
  
 0.845
D521_0637
Hypothetical protein.
       0.512
D521_0638
Hypothetical protein.
       0.512
D521_0641
Hypothetical protein.
       0.472
Your Current Organism:
beta proteobacterium CB
NCBI taxonomy Id: 543913
Other names: b. proteobacterium CB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.