STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D521_1554Short-chain dehydrogenase/reductase SDR. (231 aa)    
Predicted Functional Partners:
D521_1549
Deoxyribodipyrimidine photolyase-related protein.
 
     0.775
D521_1555
Putative phosphohistidine phosphatase, SixA.
 
     0.775
D521_1552
Hypothetical protein.
 
     0.747
D521_1553
Hypothetical protein.
 
     0.653
D521_1550
Lipoprotein, putative.
 
     0.633
D521_1556
Hypothetical protein.
       0.623
D521_1379
FAD dependent oxidoreductase.
  
     0.536
D521_1551
Hypothetical protein.
       0.521
D521_1714
Oxidoreductase FAD/NAD(P)-binding domain protein.
  
 0.471
D521_0227
Malic enzyme.
  
 
 0.433
Your Current Organism:
beta proteobacterium CB
NCBI taxonomy Id: 543913
Other names: b. proteobacterium CB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.