STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D521_1567Nitroreductase. (200 aa)    
Predicted Functional Partners:
D521_0102
ABC-2 type transporter.
  
  
 0.681
D521_2072
Hypothetical protein.
  
  
 0.560
D521_2103
Hypothetical protein.
  
  
 0.560
D521_1568
Hypothetical protein.
       0.517
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.483
D521_0395
Biphenyl-2,3-diol 1,2-dioxygenase III.
  
    0.456
D521_0093
Glutamate synthase (ferredoxin).
     
 0.423
D521_1714
Oxidoreductase FAD/NAD(P)-binding domain protein.
     
 0.403
Your Current Organism:
beta proteobacterium CB
NCBI taxonomy Id: 543913
Other names: b. proteobacterium CB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.