STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT53679.1SPFH domain, Band 7 family protein. (305 aa)    
Predicted Functional Partners:
KRT54426.1
Membrane protease FtsH catalytic subunit; Belongs to the AAA ATPase family.
   
 0.990
KRT53678.1
Membrane protein implicated in regulation of membrane protease activity.
 
  
 0.960
KRT53829.1
Rhomboid family GlyGly-CTERM serine protease.
   
 0.900
KRT56321.1
Methionine synthase (B12-dependent).
   
 0.801
KRT54614.1
ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
   
 0.783
KRT55185.1
Putative Zn-dependent peptidase.
  
 0.766
KRT55186.1
Putative Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
 0.760
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.585
KRT53597.1
Dihydrolipoamide dehydrogenase.
  
 0.581
KRT53680.1
tRNA(Ile)-lysidine synthase TilS/MesJ; Belongs to the TtcA family.
       0.572
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.