STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT53806.1Gamma-glutamyl:cysteine ligase YbdK, ATP-grasp superfamily. (472 aa)    
Predicted Functional Partners:
KRT53807.1
Succinylglutamate desuccinylase / Aspartoacylase family.
 
     0.940
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.812
KRT53805.1
Nucleotidyl transferase.
       0.795
KRT55729.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.664
KRT54153.1
gamma-glutamyltransferase/Threonine peptidase/MEROPS family T03.
 
  
 0.605
KRT53808.1
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation); Contains GATase1-like domain.
       0.574
KRT54881.1
Peptidase MA superfamily.
  
  
 0.572
gshA
Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.558
KRT54347.1
Acetylornithine deacetylase.
  
  
  0.557
KRT55181.1
Gamma-glutamyltranspeptidase.
    
 0.549
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.