Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRT54481.1 | KRT54482.1 | Ga0074115_1077 | Ga0074115_1078 | Hypothetical protein. | Peptidase family M23/LysM domain. | 0.714 |
| KRT54481.1 | KRT54483.1 | Ga0074115_1077 | Ga0074115_1079 | Hypothetical protein. | Putative membrane protein YqaA, SNARE-associated domain. | 0.440 |
| KRT54481.1 | pcm | Ga0074115_1077 | Ga0074115_10710 | Hypothetical protein. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.440 |
| KRT54481.1 | rpoS | Ga0074115_1077 | Ga0074115_1076 | Hypothetical protein. | RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.773 |
| KRT54481.1 | surE | Ga0074115_1077 | Ga0074115_10711 | Hypothetical protein. | 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.440 |
| KRT54482.1 | KRT54481.1 | Ga0074115_1078 | Ga0074115_1077 | Peptidase family M23/LysM domain. | Hypothetical protein. | 0.714 |
| KRT54482.1 | KRT54483.1 | Ga0074115_1078 | Ga0074115_1079 | Peptidase family M23/LysM domain. | Putative membrane protein YqaA, SNARE-associated domain. | 0.546 |
| KRT54482.1 | pcm | Ga0074115_1078 | Ga0074115_10710 | Peptidase family M23/LysM domain. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.524 |
| KRT54482.1 | rpoS | Ga0074115_1078 | Ga0074115_1076 | Peptidase family M23/LysM domain. | RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.838 |
| KRT54482.1 | surE | Ga0074115_1078 | Ga0074115_10711 | Peptidase family M23/LysM domain. | 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.654 |
| KRT54483.1 | KRT54481.1 | Ga0074115_1079 | Ga0074115_1077 | Putative membrane protein YqaA, SNARE-associated domain. | Hypothetical protein. | 0.440 |
| KRT54483.1 | KRT54482.1 | Ga0074115_1079 | Ga0074115_1078 | Putative membrane protein YqaA, SNARE-associated domain. | Peptidase family M23/LysM domain. | 0.546 |
| KRT54483.1 | pcm | Ga0074115_1079 | Ga0074115_10710 | Putative membrane protein YqaA, SNARE-associated domain. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.782 |
| KRT54483.1 | rpoS | Ga0074115_1079 | Ga0074115_1076 | Putative membrane protein YqaA, SNARE-associated domain. | RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.519 |
| KRT54483.1 | surE | Ga0074115_1079 | Ga0074115_10711 | Putative membrane protein YqaA, SNARE-associated domain. | 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.805 |
| pcm | KRT54481.1 | Ga0074115_10710 | Ga0074115_1077 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Hypothetical protein. | 0.440 |
| pcm | KRT54482.1 | Ga0074115_10710 | Ga0074115_1078 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Peptidase family M23/LysM domain. | 0.524 |
| pcm | KRT54483.1 | Ga0074115_10710 | Ga0074115_1079 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Putative membrane protein YqaA, SNARE-associated domain. | 0.782 |
| pcm | rpoS | Ga0074115_10710 | Ga0074115_1076 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. | 0.497 |
| pcm | surE | Ga0074115_10710 | Ga0074115_10711 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.861 |
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