STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT54966.1Hypothetical protein; Contain GlcG, DUF336 family. (163 aa)    
Predicted Functional Partners:
KRT55888.1
Outer membrane protein TolC.
  
     0.708
KRT55887.1
Thioredoxin-related protein.
 
     0.696
KRT54186.1
Hypothetical protein.
  
     0.601
KRT55980.1
Alpha/beta hydrolase family.
  
     0.593
KRT56080.1
Rhodanese-like domain.
  
     0.578
KRT56347.1
Rhodanese-related sulfurtransferase.
  
     0.578
KRT53796.1
Thioredoxin-related protein.
 
     0.566
KRT56372.1
Rhodanese-like domain.
  
     0.561
KRT55711.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.538
KRT54682.1
Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II.
  
     0.516
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.