STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT55138.1Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (923 aa)    
Predicted Functional Partners:
KRT54081.1
Ferredoxin.
    
 0.864
KRT54309.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
 0.832
KRT54078.1
Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
    
 0.831
KRT55446.1
Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
    
 0.831
KRT55905.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
 0.831
KRT55440.1
Oxaloacetate decarboxylase alpha subunit.
  
 
 0.817
KRT56555.1
Phosphate acetyl/butaryl transferase/Malic enzyme, NAD binding domain/Malic enzyme, N-terminal domain.
  
 
 0.805
KRT53998.1
FAD/FMN-containing dehydrogenase.
    
 0.690
KRT55576.1
FAD/FMN-containing dehydrogenase.
    
 0.690
KRT55285.1
4Fe-4S dicluster domain.
    
 0.671
Your Current Organism:
endosymbiont of Ridgeia
NCBI taxonomy Id: 54398
Other names: Ridgeia piscesae endosymbiont, e. of Ridgeia piscesae, endosymbiont of Ridgeia piscesae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.